Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 RN7SL510P-201ENST00000581311 263 ntBASIC20.97■□□□□ 0.95
CHD7Q9P2D1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 AC018553.1-201ENST00000616682 1458 ntBASIC20.97■□□□□ 0.95
CHD7Q9P2D1 KRT8P45-201ENST00000414328 1447 ntBASIC20.97■□□□□ 0.95
CHD7Q9P2D1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 SPDYE13P-201ENST00000445314 798 ntBASIC20.97■□□□□ 0.95
CHD7Q9P2D1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 HOMER2P1-201ENST00000455653 964 ntBASIC20.97■□□□□ 0.95
CHD7Q9P2D1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 AC141257.4-201ENST00000634557 245 ntBASIC20.97■□□□□ 0.95
CHD7Q9P2D1 AC136944.6-201ENST00000634818 245 ntBASIC20.97■□□□□ 0.95
CHD7Q9P2D1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 LINC01465-201ENST00000408887 1940 ntBASIC20.97■□□□□ 0.95
CHD7Q9P2D1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD7Q9P2D1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 AC004951.3-201ENST00000418645 1148 ntBASIC20.96■□□□□ 0.95
CHD7Q9P2D1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 AL512604.3-201ENST00000569583 964 ntBASIC20.96■□□□□ 0.95
CHD7Q9P2D1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD7Q9P2D1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 EP400NL-214ENST00000641289 2402 ntBASIC20.95■□□□□ 0.94
CHD7Q9P2D1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 TSPY17P-201ENST00000450329 467 ntBASIC20.95■□□□□ 0.94
CHD7Q9P2D1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD7Q9P2D1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 KRT17P6-201ENST00000453795 1220 ntBASIC20.94■□□□□ 0.94
CHD7Q9P2D1 CR769767.2-201ENST00000622735 460 ntBASIC20.94■□□□□ 0.94
CHD7Q9P2D1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 NPAP1P7-201ENST00000613027 823 ntBASIC20.94■□□□□ 0.94
CHD7Q9P2D1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms