Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 BCL2-203ENST00000589955 5011 ntBASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC68Q9H2F9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC68Q9H2F9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 TSPY6P-201ENST00000448518 926 ntBASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC68Q9H2F9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 AC120498.9-201ENST00000339021 3867 ntBASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC68Q9H2F9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 AC091874.3-201ENST00000512672 1195 ntBASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
CCDC68Q9H2F9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms