Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RPAP1Q9BWH6 KRT8P17-201ENST00000453110 1448 ntBASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 AL353807.1-201ENST00000427475 662 ntBASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 KRT16P5-201ENST00000455284 522 ntBASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.94■■□□□ 1.42
RPAP1Q9BWH6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 MIR1224-201ENST00000408193 85 ntBASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RPAP1Q9BWH6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 AC010331.1-201ENST00000611423 582 ntBASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 AC026471.5-201ENST00000615068 467 ntBASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RPAP1Q9BWH6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 AF186192.3-201ENST00000583427 947 ntBASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 AC133561.5-201ENST00000635547 218 ntBASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
RPAP1Q9BWH6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
RPAP1Q9BWH6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RPAP1Q9BWH6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RPAP1Q9BWH6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.89■■□□□ 1.42
RPAP1Q9BWH6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.89■■□□□ 1.42
RPAP1Q9BWH6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RPAP1Q9BWH6 AC124283.5-201ENST00000624661 1809 ntBASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms