Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 AL691432.2-201ENST00000607222 2038 ntBASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.43■□□□□ 0.86
CDK5RAP1Q96SZ6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 KRT16P1-201ENST00000399124 1418 ntBASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDK5RAP1Q96SZ6 AC092667.1-201ENST00000434301 2586 ntBASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 LINC01006-201ENST00000333319 2292 ntBASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 TSPY7P-201ENST00000431358 1114 ntBASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 AL355355.2-201ENST00000442321 338 ntBASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 AL445675.2-201ENST00000620291 557 ntBASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 AC099778.1-201ENST00000568593 1911 ntBASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDK5RAP1Q96SZ6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 FAM197Y1-201ENST00000421178 764 ntBASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 KRT8P8-201ENST00000434750 1448 ntBASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 LINC01521-201ENST00000504184 1943 ntBASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 AC026471.5-201ENST00000615068 467 ntBASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.4■□□□□ 0.86
CDK5RAP1Q96SZ6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDK5RAP1Q96SZ6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.39■□□□□ 0.86
CDK5RAP1Q96SZ6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDK5RAP1Q96SZ6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDK5RAP1Q96SZ6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CDK5RAP1Q96SZ6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.39■□□□□ 0.86
CDK5RAP1Q96SZ6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CDK5RAP1Q96SZ6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms