Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 REXO1L12P-201ENST00000622156 912 ntBASIC20.7■□□□□ 0.9
ATP2A3Q93084 AC113410.3-201ENST00000623366 203 ntBASIC20.7■□□□□ 0.9
ATP2A3Q93084 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP2A3Q93084 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A3Q93084 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 BX088651.1-201ENST00000540551 451 ntBASIC20.69■□□□□ 0.9
ATP2A3Q93084 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 AL121906.2-201ENST00000621597 723 ntBASIC20.69■□□□□ 0.9
ATP2A3Q93084 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A3Q93084 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.69■□□□□ 0.9
ATP2A3Q93084 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A3Q93084 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP2A3Q93084 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 FP700111.2-201ENST00000619190 1892 ntBASIC20.67■□□□□ 0.9
ATP2A3Q93084 RNF165-205ENST00000588679 2904 ntBASIC20.67■□□□□ 0.9
ATP2A3Q93084 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 HLA-G-202ENST00000376815 851 ntBASIC20.67■□□□□ 0.9
ATP2A3Q93084 HLA-G-203ENST00000376818 1127 ntBASIC20.67■□□□□ 0.9
ATP2A3Q93084 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A3Q93084 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A3Q93084 AC020907.5-201ENST00000624372 1936 ntBASIC20.66■□□□□ 0.9
ATP2A3Q93084 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
ATP2A3Q93084 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP2A3Q93084 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATP2A3Q93084 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP2A3Q93084 AC211429.1-201ENST00000415277 523 ntBASIC20.66■□□□□ 0.9
ATP2A3Q93084 ECEL1P3-201ENST00000427961 737 ntBASIC20.66■□□□□ 0.9
ATP2A3Q93084 KRT16P5-201ENST00000455284 522 ntBASIC20.66■□□□□ 0.9
ATP2A3Q93084 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP2A3Q93084 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP2A3Q93084 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms