Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 AC110285.5-201ENST00000611501 352 ntBASIC20.67■□□□□ 0.9
RNF139Q8WU17 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF139Q8WU17 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF139Q8WU17 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 AC133681.1-201ENST00000465482 601 ntBASIC20.66■□□□□ 0.9
RNF139Q8WU17 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 AP006294.2-201ENST00000641667 209 ntBASIC20.66■□□□□ 0.9
RNF139Q8WU17 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 NBPF21P-201ENST00000425093 1451 ntBASIC20.66■□□□□ 0.9
RNF139Q8WU17 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF139Q8WU17 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF139Q8WU17 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.65■□□□□ 0.9
RNF139Q8WU17 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF139Q8WU17 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.65■□□□□ 0.9
RNF139Q8WU17 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF139Q8WU17 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RNF139Q8WU17 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
RNF139Q8WU17 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF139Q8WU17 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF139Q8WU17 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.64■□□□□ 0.9
RNF139Q8WU17 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF139Q8WU17 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.64■□□□□ 0.9
RNF139Q8WU17 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF139Q8WU17 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
RNF139Q8WU17 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF139Q8WU17 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF139Q8WU17 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF139Q8WU17 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF139Q8WU17 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms