Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SNED1Q8TER0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNED1Q8TER0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 AC026310.3-201ENST00000625186 2373 ntBASIC24.06■■□□□ 1.44
SNED1Q8TER0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNED1Q8TER0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 FAM207BP-201ENST00000447172 505 ntBASIC24.06■■□□□ 1.44
SNED1Q8TER0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SNED1Q8TER0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SNED1Q8TER0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 DPP3P2-201ENST00000416030 1696 ntBASIC24.06■■□□□ 1.44
SNED1Q8TER0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.06■■□□□ 1.44
SNED1Q8TER0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.05■■□□□ 1.44
SNED1Q8TER0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.05■■□□□ 1.44
SNED1Q8TER0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNED1Q8TER0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNED1Q8TER0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNED1Q8TER0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SNED1Q8TER0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SNED1Q8TER0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.05■■□□□ 1.44
SNED1Q8TER0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC24.05■■□□□ 1.44
SNED1Q8TER0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.05■■□□□ 1.44
SNED1Q8TER0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNED1Q8TER0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.05■■□□□ 1.44
SNED1Q8TER0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNED1Q8TER0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.05■■□□□ 1.44
SNED1Q8TER0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNED1Q8TER0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNED1Q8TER0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNED1Q8TER0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNED1Q8TER0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
SNED1Q8TER0 CCR12P-201ENST00000446203 998 ntBASIC24.04■■□□□ 1.44
SNED1Q8TER0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.04■■□□□ 1.44
SNED1Q8TER0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.04■■□□□ 1.44
SNED1Q8TER0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.04■■□□□ 1.44
SNED1Q8TER0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.04■■□□□ 1.44
SNED1Q8TER0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
SNED1Q8TER0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.04■■□□□ 1.44
SNED1Q8TER0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC24.04■■□□□ 1.44
SNED1Q8TER0 AC011558.1-201ENST00000623459 338 ntBASIC24.04■■□□□ 1.44
SNED1Q8TER0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNED1Q8TER0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNED1Q8TER0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.04■■□□□ 1.44
SNED1Q8TER0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNED1Q8TER0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.03■■□□□ 1.44
SNED1Q8TER0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNED1Q8TER0 PCED1CP-201ENST00000419887 785 ntBASIC24.03■■□□□ 1.44
SNED1Q8TER0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNED1Q8TER0 KRT18P48-201ENST00000434763 852 ntBASIC24.03■■□□□ 1.44
SNED1Q8TER0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
SNED1Q8TER0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.03■■□□□ 1.44
SNED1Q8TER0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.03■■□□□ 1.44
SNED1Q8TER0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.03■■□□□ 1.44
SNED1Q8TER0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.03■■□□□ 1.44
SNED1Q8TER0 AC008622.2-201ENST00000617006 1229 ntBASIC24.03■■□□□ 1.44
SNED1Q8TER0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNED1Q8TER0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.03■■□□□ 1.44
SNED1Q8TER0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNED1Q8TER0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNED1Q8TER0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SNED1Q8TER0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.02■■□□□ 1.44
SNED1Q8TER0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.02■■□□□ 1.44
SNED1Q8TER0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.02■■□□□ 1.44
SNED1Q8TER0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.02■■□□□ 1.44
SNED1Q8TER0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.02■■□□□ 1.44
SNED1Q8TER0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.02■■□□□ 1.44
SNED1Q8TER0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 AC116407.4-201ENST00000623319 1061 ntBASIC24.02■■□□□ 1.44
SNED1Q8TER0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SNED1Q8TER0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.02■■□□□ 1.44
SNED1Q8TER0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.02■■□□□ 1.44
SNED1Q8TER0 PHGDH-210ENST00000641115 1638 ntBASIC24.02■■□□□ 1.44
SNED1Q8TER0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SNED1Q8TER0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
SNED1Q8TER0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SNED1Q8TER0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNED1Q8TER0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNED1Q8TER0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms