Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 AC245052.3-201ENST00000450182 901 ntBASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 EEF1DP3-203ENST00000566025 782 ntBASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 AC090164.3-201ENST00000610780 2143 ntBASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 AC136469.2-201ENST00000623944 1028 ntBASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM11BQ8TCY0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.77□□□□□ -0.36
SMIM11BQ8TCY0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM11BQ8TCY0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.77□□□□□ -0.36
SMIM11BQ8TCY0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM11BQ8TCY0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
SMIM11BQ8TCY0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SMIM11BQ8TCY0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM11BQ8TCY0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM11BQ8TCY0 SERBP1P1-201ENST00000396021 1160 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms