Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 HBZP1-201ENST00000354915 429 ntBASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.45■■□□□ 1.83
COL22A1Q8NFW1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 MIR3180-1-201ENST00000580374 94 ntBASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 MIR3180-3-201ENST00000584616 94 ntBASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL22A1Q8NFW1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL22A1Q8NFW1 PHGDH-210ENST00000641115 1638 ntBASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 AL022342.1-201ENST00000400363 863 ntBASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC26.43■■□□□ 1.82
COL22A1Q8NFW1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 AL031008.1-201ENST00000619963 541 ntBASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL22A1Q8NFW1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.41■■□□□ 1.82
COL22A1Q8NFW1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 UNC93B7-201ENST00000509439 705 ntBASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 GCSHP2-201ENST00000560971 527 ntBASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 CKBP1-201ENST00000565489 1086 ntBASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 AC140113.3-201ENST00000605663 199 ntBASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL22A1Q8NFW1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms