Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.31■■□□□ 1
VPS52Q8N1B4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS52Q8N1B4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS52Q8N1B4 NUDT16P1-203ENST00000513809 620 ntBASIC21.31■■□□□ 1
VPS52Q8N1B4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.31■■□□□ 1
VPS52Q8N1B4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS52Q8N1B4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.31■■□□□ 1
VPS52Q8N1B4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.31■■□□□ 1
VPS52Q8N1B4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
VPS52Q8N1B4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS52Q8N1B4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS52Q8N1B4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.31■■□□□ 1
VPS52Q8N1B4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS52Q8N1B4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
VPS52Q8N1B4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.3■■□□□ 1
VPS52Q8N1B4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.3■■□□□ 1
VPS52Q8N1B4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS52Q8N1B4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.3■■□□□ 1
VPS52Q8N1B4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.3■■□□□ 1
VPS52Q8N1B4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS52Q8N1B4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS52Q8N1B4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
VPS52Q8N1B4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.3■■□□□ 1
VPS52Q8N1B4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
VPS52Q8N1B4 RBM17P1-201ENST00000453646 1190 ntBASIC21.3■■□□□ 1
VPS52Q8N1B4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS52Q8N1B4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.3■■□□□ 1
VPS52Q8N1B4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
VPS52Q8N1B4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
VPS52Q8N1B4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
VPS52Q8N1B4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.3■■□□□ 1
VPS52Q8N1B4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
VPS52Q8N1B4 PLK5-205ENST00000642079 1969 ntBASIC21.3■■□□□ 1
VPS52Q8N1B4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
VPS52Q8N1B4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.29■■□□□ 1
VPS52Q8N1B4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
VPS52Q8N1B4 TMPOP1-202ENST00000424642 1267 ntBASIC21.29■■□□□ 1
VPS52Q8N1B4 REXO1L10P-201ENST00000615707 1290 ntBASIC21.29■■□□□ 1
VPS52Q8N1B4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
VPS52Q8N1B4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
VPS52Q8N1B4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
VPS52Q8N1B4 KRT8P20-201ENST00000423953 1409 ntBASIC21.29■■□□□ 1
VPS52Q8N1B4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
VPS52Q8N1B4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS52Q8N1B4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.28■■□□□ 1
VPS52Q8N1B4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS52Q8N1B4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS52Q8N1B4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
VPS52Q8N1B4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
VPS52Q8N1B4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS52Q8N1B4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS52Q8N1B4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
VPS52Q8N1B4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.28■■□□□ 1
VPS52Q8N1B4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.28■■□□□ 1
VPS52Q8N1B4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS52Q8N1B4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.28■■□□□ 1
VPS52Q8N1B4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VPS52Q8N1B4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
VPS52Q8N1B4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.28■■□□□ 1
VPS52Q8N1B4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.28■■□□□ 1
VPS52Q8N1B4 AC079598.2-202ENST00000546624 1451 ntBASIC21.27■■□□□ 1
VPS52Q8N1B4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS52Q8N1B4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
VPS52Q8N1B4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
VPS52Q8N1B4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VPS52Q8N1B4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.27■■□□□ 1
VPS52Q8N1B4 UNC93B2-201ENST00000285383 730 ntBASIC21.27■■□□□ 1
VPS52Q8N1B4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
VPS52Q8N1B4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.27■■□□□ 1
VPS52Q8N1B4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.27■■□□□ 1
VPS52Q8N1B4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.27■■□□□ 1
VPS52Q8N1B4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.27■■□□□ 1
VPS52Q8N1B4 RN7SL850P-201ENST00000579959 291 ntBASIC21.27■■□□□ 1
VPS52Q8N1B4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.27■■□□□ 1
VPS52Q8N1B4 AL031963.3-201ENST00000606441 850 ntBASIC21.27■■□□□ 1
VPS52Q8N1B4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.27■■□□□ 1
VPS52Q8N1B4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
VPS52Q8N1B4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.27■■□□□ 1
VPS52Q8N1B4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.27■■□□□ 1
VPS52Q8N1B4 LINC01521-201ENST00000504184 1943 ntBASIC21.27■■□□□ 1
VPS52Q8N1B4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.27■■□□□ 1
VPS52Q8N1B4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.27■■□□□ 1
VPS52Q8N1B4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS52Q8N1B4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS52Q8N1B4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms