Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LINC00346Q8IVM7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
LINC00346Q8IVM7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LINC00346Q8IVM7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
LINC00346Q8IVM7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LINC00346Q8IVM7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LINC00346Q8IVM7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00346Q8IVM7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 SLC29A4P1-201ENST00000398760 971 ntBASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00346Q8IVM7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 AC005332.7-201ENST00000614046 2005 ntBASIC17.37■□□□□ 0.37
LINC00346Q8IVM7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 GUSBP6-202ENST00000438529 1198 ntBASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 AC018553.1-201ENST00000616682 1458 ntBASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00346Q8IVM7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms