Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 AL032819.2-201ENST00000624543 2162 ntBASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD1LQ86WJ1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 AC098818.2-201ENST00000564925 2320 ntBASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD1LQ86WJ1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 BX323043.1-201ENST00000641006 1765 ntBASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 AC083880.1-201ENST00000608266 535 ntBASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 HLA-B-256ENST00000639848 1089 ntBASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
CHD1LQ86WJ1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 RPS2P52-201ENST00000469610 820 ntBASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 AC092368.3-202ENST00000574180 1591 ntBASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHD1LQ86WJ1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 AL109923.1-201ENST00000618799 583 ntBASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms