Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 AL512604.3-201ENST00000569583 964 ntBASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 AC011558.1-201ENST00000623459 338 ntBASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 AL121956.5-201ENST00000625261 221 ntBASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 TMEM179-206ENST00000616017 1645 ntBASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR3Q6P9H4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 AL031432.5-201ENST00000641059 760 ntBASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 AC007225.1-201ENST00000566331 1836 ntBASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.24■□□□□ 0.99
CNKSR3Q6P9H4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 AL353719.1-201ENST00000566847 864 ntBASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CNKSR3Q6P9H4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 PCED1CP-201ENST00000419887 785 ntBASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 HOMER2P1-201ENST00000455653 964 ntBASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 FAM86EP-206ENST00000510506 987 ntBASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 KRT126P-201ENST00000549467 1181 ntBASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CNKSR3Q6P9H4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 KRT8P8-201ENST00000434750 1448 ntBASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.21■□□□□ 0.99
CNKSR3Q6P9H4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms