Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NIFKP9-201ENST00000419265 221 ntBASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 TSPY15P-201ENST00000457163 923 ntBASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 KRT18P16-201ENST00000510337 1294 ntBASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 AP003071.4-201ENST00000562276 1284 ntBASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
H3F3CQ6NXT2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 AL355355.2-201ENST00000442321 338 ntBASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 C1QL1P1-201ENST00000568105 661 ntBASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
H3F3CQ6NXT2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 NUDT16P1-203ENST00000513809 620 ntBASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 AL391422.3-201ENST00000603791 2761 ntBASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H3F3CQ6NXT2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 AC211429.1-201ENST00000415277 523 ntBASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
H3F3CQ6NXT2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
H3F3CQ6NXT2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms