Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 AC011484.1-201ENST00000377652 1995 ntBASIC19.2■□□□□ 0.66
RIF1Q5UIP0 AC127496.7-201ENST00000625110 1798 ntBASIC19.2■□□□□ 0.66
RIF1Q5UIP0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIF1Q5UIP0 AC079776.4-201ENST00000511039 504 ntBASIC19.19■□□□□ 0.66
RIF1Q5UIP0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 KRT18P1-202ENST00000452408 1331 ntBASIC19.19■□□□□ 0.66
RIF1Q5UIP0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 AC080038.3-201ENST00000623346 1952 ntBASIC19.19■□□□□ 0.66
RIF1Q5UIP0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.19■□□□□ 0.66
RIF1Q5UIP0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIF1Q5UIP0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 SLC25A1P1-201ENST00000528351 927 ntBASIC19.18■□□□□ 0.66
RIF1Q5UIP0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 LINC01311-201ENST00000565162 1445 ntBASIC19.18■□□□□ 0.66
RIF1Q5UIP0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 AC012615.1-201ENST00000565797 1299 ntBASIC19.18■□□□□ 0.66
RIF1Q5UIP0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIF1Q5UIP0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 GCSHP2-201ENST00000560971 527 ntBASIC19.17■□□□□ 0.66
RIF1Q5UIP0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 AC091304.2-201ENST00000564639 760 ntBASIC19.17■□□□□ 0.66
RIF1Q5UIP0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 AC140113.2-201ENST00000604370 208 ntBASIC19.17■□□□□ 0.66
RIF1Q5UIP0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIF1Q5UIP0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 AC011498.5-201ENST00000592027 486 ntBASIC19.16■□□□□ 0.66
RIF1Q5UIP0 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.16■□□□□ 0.66
RIF1Q5UIP0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 AC092597.1-201ENST00000487352 616 ntBASIC19.16■□□□□ 0.66
RIF1Q5UIP0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIF1Q5UIP0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIF1Q5UIP0 BX842568.4-201ENST00000421222 227 ntBASIC19.15■□□□□ 0.66
RIF1Q5UIP0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.15■□□□□ 0.66
RIF1Q5UIP0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RIF1Q5UIP0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RIF1Q5UIP0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIF1Q5UIP0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RIF1Q5UIP0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms