Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AC133561.5-201ENST00000635547 218 ntBASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 AP002982.1-201ENST00000492365 877 ntBASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 AC097493.4-201ENST00000641197 219 ntBASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARFGEF3Q5TH69 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 AC026471.5-201ENST00000615068 467 ntBASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 AC079598.2-202ENST00000546624 1451 ntBASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ARFGEF3Q5TH69 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 RN7SL850P-201ENST00000579959 291 ntBASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 AP006587.1-201ENST00000534129 1502 ntBASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 AC092667.1-201ENST00000434301 2586 ntBASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 KRT16P6-202ENST00000425692 1426 ntBASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 AC026271.3-201ENST00000571884 352 ntBASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.72■□□□□ 0.27
ARFGEF3Q5TH69 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 AL355355.2-201ENST00000442321 338 ntBASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 AL031985.4-201ENST00000642138 673 ntBASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.71■□□□□ 0.27
ARFGEF3Q5TH69 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ARFGEF3Q5TH69 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ARFGEF3Q5TH69 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARFGEF3Q5TH69 AL445675.2-201ENST00000620291 557 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms