Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.4■□□□□ 0.7
SRP54P61011 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SRP54P61011 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP54P61011 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.4■□□□□ 0.7
SRP54P61011 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.4■□□□□ 0.7
SRP54P61011 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SRP54P61011 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.4■□□□□ 0.7
SRP54P61011 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.4■□□□□ 0.7
SRP54P61011 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.4■□□□□ 0.7
SRP54P61011 AC020907.5-201ENST00000624372 1936 ntBASIC19.4■□□□□ 0.7
SRP54P61011 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP54P61011 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP54P61011 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRP54P61011 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.4■□□□□ 0.7
SRP54P61011 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.4■□□□□ 0.7
SRP54P61011 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRP54P61011 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SRP54P61011 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.4■□□□□ 0.7
SRP54P61011 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP54P61011 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRP54P61011 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SRP54P61011 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SRP54P61011 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRP54P61011 ECEL1P3-201ENST00000427961 737 ntBASIC19.39■□□□□ 0.69
SRP54P61011 YBX1P10-201ENST00000444752 975 ntBASIC19.39■□□□□ 0.69
SRP54P61011 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SRP54P61011 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.39■□□□□ 0.69
SRP54P61011 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.39■□□□□ 0.69
SRP54P61011 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRP54P61011 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.39■□□□□ 0.69
SRP54P61011 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRP54P61011 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP54P61011 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SRP54P61011 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRP54P61011 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
SRP54P61011 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
SRP54P61011 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SRP54P61011 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP54P61011 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.38■□□□□ 0.69
SRP54P61011 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRP54P61011 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRP54P61011 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SRP54P61011 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRP54P61011 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.38■□□□□ 0.69
SRP54P61011 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRP54P61011 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRP54P61011 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRP54P61011 NIFKP9-201ENST00000419265 221 ntBASIC19.38■□□□□ 0.69
SRP54P61011 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.38■□□□□ 0.69
SRP54P61011 KSR1P1-201ENST00000446298 240 ntBASIC19.38■□□□□ 0.69
SRP54P61011 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.38■□□□□ 0.69
SRP54P61011 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.38■□□□□ 0.69
SRP54P61011 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SRP54P61011 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.38■□□□□ 0.69
SRP54P61011 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SRP54P61011 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.38■□□□□ 0.69
SRP54P61011 CR392000.1-201ENST00000624770 1228 ntBASIC19.38■□□□□ 0.69
SRP54P61011 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.38■□□□□ 0.69
SRP54P61011 BX119927.1-201ENST00000636596 1552 ntBASIC19.38■□□□□ 0.69
SRP54P61011 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SRP54P61011 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.37■□□□□ 0.69
SRP54P61011 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
SRP54P61011 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
SRP54P61011 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SRP54P61011 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.37■□□□□ 0.69
SRP54P61011 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.37■□□□□ 0.69
SRP54P61011 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.37■□□□□ 0.69
SRP54P61011 NUDT16P1-203ENST00000513809 620 ntBASIC19.37■□□□□ 0.69
SRP54P61011 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.37■□□□□ 0.69
SRP54P61011 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.37■□□□□ 0.69
SRP54P61011 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.37■□□□□ 0.69
SRP54P61011 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.37■□□□□ 0.69
SRP54P61011 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.37■□□□□ 0.69
SRP54P61011 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.37■□□□□ 0.69
SRP54P61011 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SRP54P61011 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
SRP54P61011 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.37■□□□□ 0.69
SRP54P61011 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP54P61011 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SRP54P61011 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP54P61011 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms