Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEK3P51956 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NEK3P51956 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK3P51956 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.27■□□□□ 0.84
NEK3P51956 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.27■□□□□ 0.84
NEK3P51956 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.27■□□□□ 0.84
NEK3P51956 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.27■□□□□ 0.84
NEK3P51956 AC069544.1-201ENST00000609399 999 ntBASIC20.27■□□□□ 0.84
NEK3P51956 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NEK3P51956 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK3P51956 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK3P51956 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
NEK3P51956 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK3P51956 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK3P51956 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEK3P51956 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.27■□□□□ 0.83
NEK3P51956 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.26■□□□□ 0.83
NEK3P51956 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NEK3P51956 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
NEK3P51956 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.26■□□□□ 0.83
NEK3P51956 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
NEK3P51956 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.26■□□□□ 0.83
NEK3P51956 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.26■□□□□ 0.83
NEK3P51956 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.26■□□□□ 0.83
NEK3P51956 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.26■□□□□ 0.83
NEK3P51956 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.26■□□□□ 0.83
NEK3P51956 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NEK3P51956 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEK3P51956 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK3P51956 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK3P51956 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK3P51956 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
NEK3P51956 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.25■□□□□ 0.83
NEK3P51956 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NEK3P51956 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEK3P51956 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NEK3P51956 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK3P51956 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.25■□□□□ 0.83
NEK3P51956 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NEK3P51956 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NEK3P51956 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.25■□□□□ 0.83
NEK3P51956 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.25■□□□□ 0.83
NEK3P51956 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK3P51956 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEK3P51956 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NEK3P51956 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NEK3P51956 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.24■□□□□ 0.83
NEK3P51956 AC023632.3-201ENST00000521633 145 ntBASIC20.24■□□□□ 0.83
NEK3P51956 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.24■□□□□ 0.83
NEK3P51956 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 AC233263.1-201ENST00000578059 224 ntBASIC20.24■□□□□ 0.83
NEK3P51956 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.24■□□□□ 0.83
NEK3P51956 AC120498.8-201ENST00000614275 531 ntBASIC20.24■□□□□ 0.83
NEK3P51956 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.24■□□□□ 0.83
NEK3P51956 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.24■□□□□ 0.83
NEK3P51956 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NEK3P51956 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NEK3P51956 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEK3P51956 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.24■□□□□ 0.83
NEK3P51956 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NEK3P51956 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NEK3P51956 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK3P51956 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEK3P51956 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.23■□□□□ 0.83
NEK3P51956 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.23■□□□□ 0.83
NEK3P51956 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEK3P51956 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.23■□□□□ 0.83
NEK3P51956 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.23■□□□□ 0.83
NEK3P51956 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
NEK3P51956 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.23■□□□□ 0.83
NEK3P51956 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.23■□□□□ 0.83
NEK3P51956 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.23■□□□□ 0.83
NEK3P51956 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEK3P51956 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NEK3P51956 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEK3P51956 AC098818.2-201ENST00000564925 2320 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms