Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC006538.3-201ENST00000612495 578 ntBASIC22.61■■□□□ 1.21
TM4SF4P48230 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22.61■■□□□ 1.21
TM4SF4P48230 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TM4SF4P48230 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
TM4SF4P48230 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TM4SF4P48230 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
TM4SF4P48230 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
TM4SF4P48230 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TM4SF4P48230 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.6■■□□□ 1.21
TM4SF4P48230 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TM4SF4P48230 KRT8P10-201ENST00000450021 1447 ntBASIC22.6■■□□□ 1.21
TM4SF4P48230 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TM4SF4P48230 AC004870.1-201ENST00000315132 882 ntBASIC22.6■■□□□ 1.21
TM4SF4P48230 CKBP1-201ENST00000565489 1086 ntBASIC22.6■■□□□ 1.21
TM4SF4P48230 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TM4SF4P48230 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC22.6■■□□□ 1.21
TM4SF4P48230 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TM4SF4P48230 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.59■■□□□ 1.21
TM4SF4P48230 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TM4SF4P48230 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.59■■□□□ 1.21
TM4SF4P48230 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.59■■□□□ 1.21
TM4SF4P48230 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TM4SF4P48230 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TM4SF4P48230 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TM4SF4P48230 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.59■■□□□ 1.21
TM4SF4P48230 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.59■■□□□ 1.21
TM4SF4P48230 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.59■■□□□ 1.21
TM4SF4P48230 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC22.59■■□□□ 1.21
TM4SF4P48230 AC092119.3-201ENST00000612618 583 ntBASIC22.59■■□□□ 1.21
TM4SF4P48230 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TM4SF4P48230 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TM4SF4P48230 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
TM4SF4P48230 AL121603.2-201ENST00000557373 2117 ntBASIC22.58■■□□□ 1.21
TM4SF4P48230 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TM4SF4P48230 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TM4SF4P48230 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.58■■□□□ 1.21
TM4SF4P48230 FAAHP1-202ENST00000446499 1238 ntBASIC22.58■■□□□ 1.21
TM4SF4P48230 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.58■■□□□ 1.21
TM4SF4P48230 PRELID1P1-202ENST00000567272 903 ntBASIC22.58■■□□□ 1.21
TM4SF4P48230 AC111152.3-201ENST00000569699 673 ntBASIC22.58■■□□□ 1.21
TM4SF4P48230 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TM4SF4P48230 NEK4P2-201ENST00000580004 1012 ntBASIC22.58■■□□□ 1.21
TM4SF4P48230 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.58■■□□□ 1.21
TM4SF4P48230 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TM4SF4P48230 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TM4SF4P48230 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
TM4SF4P48230 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.58■■□□□ 1.2
TM4SF4P48230 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.58■■□□□ 1.2
TM4SF4P48230 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
TM4SF4P48230 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.58■■□□□ 1.2
TM4SF4P48230 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
TM4SF4P48230 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.57■■□□□ 1.2
TM4SF4P48230 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.57■■□□□ 1.2
TM4SF4P48230 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.57■■□□□ 1.2
TM4SF4P48230 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.57■■□□□ 1.2
TM4SF4P48230 AC023511.2-201ENST00000618803 211 ntBASIC22.57■■□□□ 1.2
TM4SF4P48230 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.57■■□□□ 1.2
TM4SF4P48230 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
TM4SF4P48230 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TM4SF4P48230 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TM4SF4P48230 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.57■■□□□ 1.2
TM4SF4P48230 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TM4SF4P48230 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.57■■□□□ 1.2
TM4SF4P48230 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF4P48230 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF4P48230 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF4P48230 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF4P48230 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF4P48230 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF4P48230 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF4P48230 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.56■■□□□ 1.2
TM4SF4P48230 SPDYE13P-201ENST00000445314 798 ntBASIC22.56■■□□□ 1.2
TM4SF4P48230 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.56■■□□□ 1.2
TM4SF4P48230 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.56■■□□□ 1.2
TM4SF4P48230 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.56■■□□□ 1.2
TM4SF4P48230 GCSHP2-201ENST00000560971 527 ntBASIC22.56■■□□□ 1.2
TM4SF4P48230 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
TM4SF4P48230 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.56■■□□□ 1.2
TM4SF4P48230 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.56■■□□□ 1.2
TM4SF4P48230 AC092329.2-201ENST00000598402 547 ntBASIC22.56■■□□□ 1.2
TM4SF4P48230 AC004263.2-201ENST00000617183 678 ntBASIC22.56■■□□□ 1.2
TM4SF4P48230 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.56■■□□□ 1.2
TM4SF4P48230 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TM4SF4P48230 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
TM4SF4P48230 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF4P48230 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TM4SF4P48230 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF4P48230 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
TM4SF4P48230 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.55■■□□□ 1.2
TM4SF4P48230 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF4P48230 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
TM4SF4P48230 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.55■■□□□ 1.2
TM4SF4P48230 UNC93B7-201ENST00000509439 705 ntBASIC22.55■■□□□ 1.2
TM4SF4P48230 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF4P48230 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.55■■□□□ 1.2
TM4SF4P48230 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF4P48230 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
TM4SF4P48230 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF4P48230 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TM4SF4P48230 AC005229.4-201ENST00000610085 2198 ntBASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms