Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
SLC6A12P48065 AL121829.2-201ENST00000620908 328 ntBASIC19.01■□□□□ 0.63
SLC6A12P48065 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A12P48065 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19■□□□□ 0.63
SLC6A12P48065 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19■□□□□ 0.63
SLC6A12P48065 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLC6A12P48065 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19■□□□□ 0.63
SLC6A12P48065 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SLC6A12P48065 AC005332.7-201ENST00000614046 2005 ntBASIC19■□□□□ 0.63
SLC6A12P48065 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19■□□□□ 0.63
SLC6A12P48065 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19■□□□□ 0.63
SLC6A12P48065 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19■□□□□ 0.63
SLC6A12P48065 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
SLC6A12P48065 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLC6A12P48065 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLC6A12P48065 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLC6A12P48065 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC6A12P48065 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19■□□□□ 0.63
SLC6A12P48065 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19■□□□□ 0.63
SLC6A12P48065 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A12P48065 Z82202.1-201ENST00000623446 1880 ntBASIC18.99■□□□□ 0.63
SLC6A12P48065 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC6A12P48065 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC6A12P48065 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SLC6A12P48065 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A12P48065 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A12P48065 AC008403.3-201ENST00000598924 454 ntBASIC18.99■□□□□ 0.63
SLC6A12P48065 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SLC6A12P48065 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A12P48065 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A12P48065 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
SLC6A12P48065 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A12P48065 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.98■□□□□ 0.63
SLC6A12P48065 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A12P48065 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A12P48065 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC6A12P48065 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A12P48065 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A12P48065 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A12P48065 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SLC6A12P48065 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A12P48065 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A12P48065 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A12P48065 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A12P48065 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A12P48065 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SLC6A12P48065 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A12P48065 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC6A12P48065 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 AP006587.1-201ENST00000534129 1502 ntBASIC18.97■□□□□ 0.63
SLC6A12P48065 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 POM121L13P-201ENST00000422362 380 ntBASIC18.97■□□□□ 0.63
SLC6A12P48065 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC6A12P48065 YBX1P10-201ENST00000444752 975 ntBASIC18.97■□□□□ 0.63
SLC6A12P48065 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC6A12P48065 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC6A12P48065 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A12P48065 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SLC6A12P48065 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC6A12P48065 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A12P48065 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
SLC6A12P48065 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms