Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.17■□□□□ 0.66
SOX11P35716 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SOX11P35716 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SOX11P35716 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
SOX11P35716 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.16■□□□□ 0.66
SOX11P35716 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX11P35716 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SOX11P35716 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SOX11P35716 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX11P35716 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX11P35716 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.16■□□□□ 0.66
SOX11P35716 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.16■□□□□ 0.66
SOX11P35716 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX11P35716 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX11P35716 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SOX11P35716 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.16■□□□□ 0.66
SOX11P35716 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SOX11P35716 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.16■□□□□ 0.66
SOX11P35716 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.15■□□□□ 0.66
SOX11P35716 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.15■□□□□ 0.66
SOX11P35716 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SOX11P35716 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.15■□□□□ 0.66
SOX11P35716 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
SOX11P35716 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.15■□□□□ 0.66
SOX11P35716 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
SOX11P35716 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SOX11P35716 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.15■□□□□ 0.66
SOX11P35716 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.15■□□□□ 0.66
SOX11P35716 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SOX11P35716 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
SOX11P35716 AP000974.1-201ENST00000623909 2387 ntBASIC19.14■□□□□ 0.66
SOX11P35716 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SOX11P35716 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.14■□□□□ 0.65
SOX11P35716 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.14■□□□□ 0.65
SOX11P35716 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.14■□□□□ 0.65
SOX11P35716 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SOX11P35716 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SOX11P35716 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.14■□□□□ 0.65
SOX11P35716 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.14■□□□□ 0.65
SOX11P35716 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.14■□□□□ 0.65
SOX11P35716 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.14■□□□□ 0.65
SOX11P35716 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX11P35716 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SOX11P35716 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.14■□□□□ 0.65
SOX11P35716 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SOX11P35716 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.14■□□□□ 0.65
SOX11P35716 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX11P35716 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SOX11P35716 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SOX11P35716 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SOX11P35716 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX11P35716 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX11P35716 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX11P35716 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.13■□□□□ 0.65
SOX11P35716 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX11P35716 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SOX11P35716 LSM12P1-201ENST00000411836 588 ntBASIC19.13■□□□□ 0.65
SOX11P35716 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.13■□□□□ 0.65
SOX11P35716 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.13■□□□□ 0.65
SOX11P35716 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.13■□□□□ 0.65
SOX11P35716 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.13■□□□□ 0.65
SOX11P35716 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.13■□□□□ 0.65
SOX11P35716 CYP2T3P-201ENST00000601990 817 ntBASIC19.13■□□□□ 0.65
SOX11P35716 ITM2C-210ENST00000620962 501 ntBASIC19.13■□□□□ 0.65
SOX11P35716 MIR2861-201ENST00000636310 90 ntBASIC19.13■□□□□ 0.65
SOX11P35716 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX11P35716 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SOX11P35716 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX11P35716 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SOX11P35716 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.13■□□□□ 0.65
SOX11P35716 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms