Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.26■■□□□ 1.47
KCNA3P22001 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
KCNA3P22001 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.26■■□□□ 1.47
KCNA3P22001 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
KCNA3P22001 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.26■■□□□ 1.47
KCNA3P22001 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.26■■□□□ 1.47
KCNA3P22001 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
KCNA3P22001 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 AC112907.2-201ENST00000448639 330 ntBASIC24.25■■□□□ 1.47
KCNA3P22001 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.25■■□□□ 1.47
KCNA3P22001 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 RN7SL510P-201ENST00000581311 263 ntBASIC24.25■■□□□ 1.47
KCNA3P22001 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
KCNA3P22001 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
KCNA3P22001 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
KCNA3P22001 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNA3P22001 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.24■■□□□ 1.47
KCNA3P22001 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
KCNA3P22001 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNA3P22001 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNA3P22001 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.24■■□□□ 1.47
KCNA3P22001 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.24■■□□□ 1.47
KCNA3P22001 CNP-204ENST00000472031 1019 ntTSL 2 BASIC24.24■■□□□ 1.47
KCNA3P22001 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.24■■□□□ 1.47
KCNA3P22001 SKP2-204ENST00000508514 821 ntTSL 3 BASIC24.24■■□□□ 1.47
KCNA3P22001 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.24■■□□□ 1.47
KCNA3P22001 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.24■■□□□ 1.47
KCNA3P22001 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNA3P22001 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNA3P22001 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
KCNA3P22001 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
KCNA3P22001 AC005229.4-201ENST00000610085 2198 ntBASIC24.23■■□□□ 1.47
KCNA3P22001 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
KCNA3P22001 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNA3P22001 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNA3P22001 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC24.23■■□□□ 1.47
KCNA3P22001 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.23■■□□□ 1.47
KCNA3P22001 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.23■■□□□ 1.47
KCNA3P22001 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.23■■□□□ 1.47
KCNA3P22001 KRT8P45-201ENST00000414328 1447 ntBASIC24.23■■□□□ 1.47
KCNA3P22001 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
KCNA3P22001 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
KCNA3P22001 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.23■■□□□ 1.47
KCNA3P22001 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.23■■□□□ 1.47
KCNA3P22001 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
KCNA3P22001 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.23■■□□□ 1.47
KCNA3P22001 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.23■■□□□ 1.47
KCNA3P22001 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
KCNA3P22001 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNA3P22001 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
KCNA3P22001 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNA3P22001 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
KCNA3P22001 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
KCNA3P22001 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
KCNA3P22001 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
KCNA3P22001 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC24.22■■□□□ 1.47
KCNA3P22001 CA15P1-201ENST00000481698 905 ntBASIC24.22■■□□□ 1.47
KCNA3P22001 AP003041.3-201ENST00000527151 707 ntBASIC24.22■■□□□ 1.47
KCNA3P22001 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
KCNA3P22001 BCL10-202ENST00000620248 774 ntTSL 5 BASIC24.22■■□□□ 1.47
KCNA3P22001 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
KCNA3P22001 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.21■■□□□ 1.47
KCNA3P22001 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.21■■□□□ 1.47
KCNA3P22001 SPDYE13P-201ENST00000445314 798 ntBASIC24.21■■□□□ 1.47
KCNA3P22001 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.21■■□□□ 1.47
KCNA3P22001 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.21■■□□□ 1.47
KCNA3P22001 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC24.21■■□□□ 1.47
KCNA3P22001 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.21■■□□□ 1.47
KCNA3P22001 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
KCNA3P22001 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
KCNA3P22001 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.2■■□□□ 1.46
KCNA3P22001 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNA3P22001 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.2■■□□□ 1.46
KCNA3P22001 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KCNA3P22001 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KCNA3P22001 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
KCNA3P22001 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KCNA3P22001 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
KCNA3P22001 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC24.2■■□□□ 1.46
KCNA3P22001 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
KCNA3P22001 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.2■■□□□ 1.46
KCNA3P22001 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms