Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CD74P04233 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD74P04233 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
CD74P04233 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD74P04233 AC005332.8-201ENST00000622750 2735 ntBASIC16.54■□□□□ 0.24
CD74P04233 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CD74P04233 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CD74P04233 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.53■□□□□ 0.24
CD74P04233 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.53■□□□□ 0.24
CD74P04233 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 AC091305.1-201ENST00000479476 895 ntBASIC16.53■□□□□ 0.24
CD74P04233 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.53■□□□□ 0.24
CD74P04233 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CD74P04233 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.53■□□□□ 0.24
CD74P04233 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CD74P04233 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD74P04233 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CD74P04233 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CD74P04233 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD74P04233 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD74P04233 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CD74P04233 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CD74P04233 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD74P04233 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.52■□□□□ 0.24
CD74P04233 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.52■□□□□ 0.24
CD74P04233 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.52■□□□□ 0.24
CD74P04233 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.52■□□□□ 0.24
CD74P04233 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CD74P04233 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.52■□□□□ 0.23
CD74P04233 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.52■□□□□ 0.23
CD74P04233 AC090164.3-201ENST00000610780 2143 ntBASIC16.52■□□□□ 0.23
CD74P04233 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD74P04233 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.52■□□□□ 0.23
CD74P04233 KRT8P20-201ENST00000423953 1409 ntBASIC16.52■□□□□ 0.23
CD74P04233 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD74P04233 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.52■□□□□ 0.23
CD74P04233 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD74P04233 AC141586.3-201ENST00000562166 1838 ntBASIC16.52■□□□□ 0.23
CD74P04233 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.52■□□□□ 0.23
CD74P04233 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD74P04233 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.51■□□□□ 0.23
CD74P04233 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.51■□□□□ 0.23
CD74P04233 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.51■□□□□ 0.23
CD74P04233 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.51■□□□□ 0.23
CD74P04233 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.51■□□□□ 0.23
CD74P04233 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 AC106739.1-201ENST00000617035 715 ntBASIC16.51■□□□□ 0.23
CD74P04233 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD74P04233 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 AL031598.1-201ENST00000561511 1773 ntBASIC16.51■□□□□ 0.23
CD74P04233 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.51■□□□□ 0.23
CD74P04233 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD74P04233 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD74P04233 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.5■□□□□ 0.23
CD74P04233 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CD74P04233 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.5■□□□□ 0.23
CD74P04233 CYP21A1P-202ENST00000354927 1481 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms