Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT6AP02538 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT6AP02538 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT6AP02538 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT6AP02538 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
KRT6AP02538 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
KRT6AP02538 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
KRT6AP02538 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 AC093484.2-201ENST00000580996 2166 ntBASIC19.03■□□□□ 0.64
KRT6AP02538 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 MIR935-201ENST00000401179 91 ntBASIC19.03■□□□□ 0.64
KRT6AP02538 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT6AP02538 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
KRT6AP02538 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.03■□□□□ 0.64
KRT6AP02538 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT6AP02538 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT6AP02538 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.02■□□□□ 0.64
KRT6AP02538 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
KRT6AP02538 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
KRT6AP02538 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT6AP02538 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KRT6AP02538 AC005332.7-201ENST00000614046 2005 ntBASIC19.02■□□□□ 0.64
KRT6AP02538 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
KRT6AP02538 AL390719.1-204ENST00000412397 1219 ntBASIC19.02■□□□□ 0.64
KRT6AP02538 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT6AP02538 RAP2CP1-201ENST00000605103 478 ntBASIC19.02■□□□□ 0.64
KRT6AP02538 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
KRT6AP02538 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.02■□□□□ 0.64
KRT6AP02538 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT6AP02538 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT6AP02538 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT6AP02538 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.02■□□□□ 0.63
KRT6AP02538 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT6AP02538 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
KRT6AP02538 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KRT6AP02538 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT6AP02538 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KRT6AP02538 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.01■□□□□ 0.63
KRT6AP02538 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT6AP02538 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KRT6AP02538 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT6AP02538 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KRT6AP02538 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6AP02538 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19■□□□□ 0.63
KRT6AP02538 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT6AP02538 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms