Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ALDH1A1P00352 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.56■■□□□ 1.2
ALDH1A1P00352 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ALDH1A1P00352 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ALDH1A1P00352 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ALDH1A1P00352 STARP1-201ENST00000397973 869 ntBASIC22.55■■□□□ 1.2
ALDH1A1P00352 MIR3652-201ENST00000579335 131 ntBASIC22.55■■□□□ 1.2
ALDH1A1P00352 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ALDH1A1P00352 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ALDH1A1P00352 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ALDH1A1P00352 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
ALDH1A1P00352 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ALDH1A1P00352 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.54■■□□□ 1.2
ALDH1A1P00352 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ALDH1A1P00352 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ALDH1A1P00352 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.54■■□□□ 1.2
ALDH1A1P00352 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.54■■□□□ 1.2
ALDH1A1P00352 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
ALDH1A1P00352 AC004870.1-201ENST00000315132 882 ntBASIC22.54■■□□□ 1.2
ALDH1A1P00352 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ALDH1A1P00352 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.54■■□□□ 1.2
ALDH1A1P00352 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.54■■□□□ 1.2
ALDH1A1P00352 AP003041.3-201ENST00000527151 707 ntBASIC22.54■■□□□ 1.2
ALDH1A1P00352 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC22.54■■□□□ 1.2
ALDH1A1P00352 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ALDH1A1P00352 PRELID1P1-202ENST00000567272 903 ntBASIC22.54■■□□□ 1.2
ALDH1A1P00352 NEK4P2-201ENST00000580004 1012 ntBASIC22.54■■□□□ 1.2
ALDH1A1P00352 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ALDH1A1P00352 GPALPP1-207ENST00000611650 899 ntBASIC22.54■■□□□ 1.2
ALDH1A1P00352 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ALDH1A1P00352 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ALDH1A1P00352 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 FAAHP1-202ENST00000446499 1238 ntBASIC22.53■■□□□ 1.2
ALDH1A1P00352 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 AC111152.3-201ENST00000569699 673 ntBASIC22.53■■□□□ 1.2
ALDH1A1P00352 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 CR769767.2-201ENST00000622735 460 ntBASIC22.53■■□□□ 1.2
ALDH1A1P00352 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 LINC01311-201ENST00000565162 1445 ntBASIC22.53■■□□□ 1.2
ALDH1A1P00352 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
ALDH1A1P00352 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ALDH1A1P00352 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ALDH1A1P00352 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.52■■□□□ 1.2
ALDH1A1P00352 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ALDH1A1P00352 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ALDH1A1P00352 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ALDH1A1P00352 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
ALDH1A1P00352 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.52■■□□□ 1.2
ALDH1A1P00352 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
ALDH1A1P00352 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
ALDH1A1P00352 TSPY21P-201ENST00000433481 731 ntBASIC22.52■■□□□ 1.2
ALDH1A1P00352 TSPY23P-201ENST00000440136 739 ntBASIC22.52■■□□□ 1.2
ALDH1A1P00352 NPAP1P7-201ENST00000613027 823 ntBASIC22.52■■□□□ 1.2
ALDH1A1P00352 HYMAI.1-201ENST00000620949 238 ntBASIC22.52■■□□□ 1.2
ALDH1A1P00352 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
ALDH1A1P00352 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
ALDH1A1P00352 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ALDH1A1P00352 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
ALDH1A1P00352 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.52■■□□□ 1.2
ALDH1A1P00352 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
ALDH1A1P00352 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.51■■□□□ 1.19
ALDH1A1P00352 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 KRT17P6-201ENST00000453795 1220 ntBASIC22.51■■□□□ 1.19
ALDH1A1P00352 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.51■■□□□ 1.19
ALDH1A1P00352 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ALDH1A1P00352 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms