Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.54■■□□□ 1.36
MBD4O95243 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.54■■□□□ 1.36
MBD4O95243 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
MBD4O95243 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
MBD4O95243 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.53■■□□□ 1.36
MBD4O95243 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
MBD4O95243 AC009237.14-201ENST00000609975 1594 ntBASIC23.53■■□□□ 1.36
MBD4O95243 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.53■■□□□ 1.36
MBD4O95243 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.53■■□□□ 1.36
MBD4O95243 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
MBD4O95243 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.53■■□□□ 1.36
MBD4O95243 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.53■■□□□ 1.36
MBD4O95243 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.53■■□□□ 1.36
MBD4O95243 C1QL1P1-201ENST00000568105 661 ntBASIC23.53■■□□□ 1.36
MBD4O95243 MIR4497-201ENST00000583208 89 ntBASIC23.53■■□□□ 1.36
MBD4O95243 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
MBD4O95243 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MBD4O95243 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MBD4O95243 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MBD4O95243 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MBD4O95243 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MBD4O95243 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.52■■□□□ 1.36
MBD4O95243 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MBD4O95243 TUBB8P6-201ENST00000436895 1288 ntBASIC23.52■■□□□ 1.36
MBD4O95243 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.52■■□□□ 1.36
MBD4O95243 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
MBD4O95243 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
MBD4O95243 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MBD4O95243 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
MBD4O95243 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
MBD4O95243 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.51■■□□□ 1.35
MBD4O95243 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.51■■□□□ 1.35
MBD4O95243 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.51■■□□□ 1.35
MBD4O95243 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
MBD4O95243 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.51■■□□□ 1.35
MBD4O95243 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.51■■□□□ 1.35
MBD4O95243 AL353807.1-201ENST00000427475 662 ntBASIC23.51■■□□□ 1.35
MBD4O95243 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.51■■□□□ 1.35
MBD4O95243 AP002982.1-201ENST00000492365 877 ntBASIC23.51■■□□□ 1.35
MBD4O95243 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.51■■□□□ 1.35
MBD4O95243 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.51■■□□□ 1.35
MBD4O95243 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.51■■□□□ 1.35
MBD4O95243 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.51■■□□□ 1.35
MBD4O95243 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
MBD4O95243 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.51■■□□□ 1.35
MBD4O95243 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MBD4O95243 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.5■■□□□ 1.35
MBD4O95243 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.5■■□□□ 1.35
MBD4O95243 AP001412.1-201ENST00000608405 714 ntBASIC23.5■■□□□ 1.35
MBD4O95243 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
MBD4O95243 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.5■■□□□ 1.35
MBD4O95243 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.5■■□□□ 1.35
MBD4O95243 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MBD4O95243 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MBD4O95243 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
MBD4O95243 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.49■■□□□ 1.35
MBD4O95243 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MBD4O95243 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MBD4O95243 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MBD4O95243 FAM197Y1-201ENST00000421178 764 ntBASIC23.49■■□□□ 1.35
MBD4O95243 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.49■■□□□ 1.35
MBD4O95243 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.49■■□□□ 1.35
MBD4O95243 AL353708.3-201ENST00000610272 989 ntBASIC23.49■■□□□ 1.35
MBD4O95243 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
MBD4O95243 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MBD4O95243 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MBD4O95243 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.49■■□□□ 1.35
MBD4O95243 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MBD4O95243 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
MBD4O95243 PCDHAC2-203ENST00000615316 3011 ntBASIC23.48■■□□□ 1.35
MBD4O95243 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
MBD4O95243 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
MBD4O95243 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
MBD4O95243 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms