Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.07■□□□□ 0.16
SCAF4O95104 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.07■□□□□ 0.16
SCAF4O95104 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SCAF4O95104 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.07■□□□□ 0.16
SCAF4O95104 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SCAF4O95104 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SCAF4O95104 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.07■□□□□ 0.16
SCAF4O95104 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.07■□□□□ 0.16
SCAF4O95104 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.07■□□□□ 0.16
SCAF4O95104 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.07■□□□□ 0.16
SCAF4O95104 AL162430.1-201ENST00000480705 870 ntBASIC16.07■□□□□ 0.16
SCAF4O95104 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.07■□□□□ 0.16
SCAF4O95104 FAM21FP-204ENST00000608637 956 ntBASIC16.07■□□□□ 0.16
SCAF4O95104 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.07■□□□□ 0.16
SCAF4O95104 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.07■□□□□ 0.16
SCAF4O95104 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SCAF4O95104 PKD1P1-201ENST00000458669 6805 ntBASIC16.07■□□□□ 0.16
SCAF4O95104 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.07■□□□□ 0.16
SCAF4O95104 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SCAF4O95104 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.07■□□□□ 0.16
SCAF4O95104 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCAF4O95104 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SCAF4O95104 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SCAF4O95104 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SCAF4O95104 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCAF4O95104 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCAF4O95104 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.06■□□□□ 0.16
SCAF4O95104 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 KRT8P36-201ENST00000489121 1440 ntBASIC16.06■□□□□ 0.16
SCAF4O95104 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.06■□□□□ 0.16
SCAF4O95104 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.06■□□□□ 0.16
SCAF4O95104 NTF6G-201ENST00000591094 616 ntBASIC16.06■□□□□ 0.16
SCAF4O95104 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SCAF4O95104 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.06■□□□□ 0.16
SCAF4O95104 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.06■□□□□ 0.16
SCAF4O95104 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.06■□□□□ 0.16
SCAF4O95104 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCAF4O95104 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.05■□□□□ 0.16
SCAF4O95104 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SCAF4O95104 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAF4O95104 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 KRT87P-202ENST00000534226 1464 ntBASIC16.05■□□□□ 0.16
SCAF4O95104 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAF4O95104 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SCAF4O95104 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SCAF4O95104 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SCAF4O95104 LTB4R2-202ENST00000528054 3092 ntBASIC16.05■□□□□ 0.16
SCAF4O95104 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SCAF4O95104 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SCAF4O95104 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.05■□□□□ 0.16
SCAF4O95104 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAF4O95104 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.05■□□□□ 0.16
SCAF4O95104 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.05■□□□□ 0.16
SCAF4O95104 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SCAF4O95104 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SCAF4O95104 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SCAF4O95104 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SCAF4O95104 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms