Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH4O75427 AC120498.8-201ENST00000614275 531 ntBASIC20.5■□□□□ 0.87
LRCH4O75427 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH4O75427 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH4O75427 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LRCH4O75427 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH4O75427 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LRCH4O75427 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH4O75427 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LRCH4O75427 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.49■□□□□ 0.87
LRCH4O75427 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRCH4O75427 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.49■□□□□ 0.87
LRCH4O75427 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRCH4O75427 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.49■□□□□ 0.87
LRCH4O75427 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.49■□□□□ 0.87
LRCH4O75427 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 AC005332.7-201ENST00000614046 2005 ntBASIC20.49■□□□□ 0.87
LRCH4O75427 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH4O75427 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.48■□□□□ 0.87
LRCH4O75427 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.48■□□□□ 0.87
LRCH4O75427 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.48■□□□□ 0.87
LRCH4O75427 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.48■□□□□ 0.87
LRCH4O75427 AC008687.6-201ENST00000596318 630 ntBASIC20.48■□□□□ 0.87
LRCH4O75427 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LRCH4O75427 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LRCH4O75427 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.48■□□□□ 0.87
LRCH4O75427 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH4O75427 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.47■□□□□ 0.87
LRCH4O75427 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.47■□□□□ 0.87
LRCH4O75427 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.47■□□□□ 0.87
LRCH4O75427 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.47■□□□□ 0.87
LRCH4O75427 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LRCH4O75427 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.47■□□□□ 0.87
LRCH4O75427 AL121906.2-201ENST00000621597 723 ntBASIC20.47■□□□□ 0.87
LRCH4O75427 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.47■□□□□ 0.87
LRCH4O75427 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.47■□□□□ 0.87
LRCH4O75427 Z82202.1-201ENST00000623446 1880 ntBASIC20.47■□□□□ 0.87
LRCH4O75427 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LRCH4O75427 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LRCH4O75427 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRCH4O75427 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.46■□□□□ 0.87
LRCH4O75427 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRCH4O75427 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LRCH4O75427 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.46■□□□□ 0.87
LRCH4O75427 UNC93B5-201ENST00000530315 699 ntBASIC20.46■□□□□ 0.87
LRCH4O75427 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.46■□□□□ 0.87
LRCH4O75427 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
LRCH4O75427 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRCH4O75427 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRCH4O75427 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRCH4O75427 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRCH4O75427 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.45■□□□□ 0.86
LRCH4O75427 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.45■□□□□ 0.86
LRCH4O75427 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LRCH4O75427 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LRCH4O75427 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRCH4O75427 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
LRCH4O75427 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.45■□□□□ 0.86
LRCH4O75427 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.45■□□□□ 0.86
LRCH4O75427 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRCH4O75427 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.45■□□□□ 0.86
LRCH4O75427 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.45■□□□□ 0.86
LRCH4O75427 UNC93B4-201ENST00000505679 747 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms