Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
FOXD2O60548 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXD2O60548 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXD2O60548 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXD2O60548 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
FOXD2O60548 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXD2O60548 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXD2O60548 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXD2O60548 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXD2O60548 AL390955.1-201ENST00000428694 934 ntBASIC19.79■□□□□ 0.76
FOXD2O60548 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXD2O60548 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXD2O60548 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXD2O60548 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
FOXD2O60548 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXD2O60548 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
FOXD2O60548 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXD2O60548 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
FOXD2O60548 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXD2O60548 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXD2O60548 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXD2O60548 AK4P3-201ENST00000418260 669 ntBASIC19.78■□□□□ 0.76
FOXD2O60548 KRT18P56-201ENST00000507275 550 ntBASIC19.78■□□□□ 0.76
FOXD2O60548 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXD2O60548 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.78■□□□□ 0.76
FOXD2O60548 AC022616.7-201ENST00000525383 220 ntBASIC19.78■□□□□ 0.76
FOXD2O60548 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.78■□□□□ 0.76
FOXD2O60548 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.78■□□□□ 0.76
FOXD2O60548 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXD2O60548 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 LINC01006-201ENST00000333319 2292 ntBASIC19.78■□□□□ 0.76
FOXD2O60548 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXD2O60548 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXD2O60548 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXD2O60548 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXD2O60548 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXD2O60548 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FOXD2O60548 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXD2O60548 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FOXD2O60548 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FOXD2O60548 AC063952.2-201ENST00000498792 1227 ntBASIC19.77■□□□□ 0.76
FOXD2O60548 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
FOXD2O60548 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXD2O60548 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXD2O60548 AC006011.2-201ENST00000621313 1158 ntBASIC19.77■□□□□ 0.76
FOXD2O60548 CR392000.1-201ENST00000624770 1228 ntBASIC19.77■□□□□ 0.76
FOXD2O60548 AL358472.4-201ENST00000633140 710 ntBASIC19.77■□□□□ 0.76
FOXD2O60548 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
FOXD2O60548 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXD2O60548 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXD2O60548 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXD2O60548 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXD2O60548 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
FOXD2O60548 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.77■□□□□ 0.75
FOXD2O60548 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
FOXD2O60548 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
FOXD2O60548 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXD2O60548 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FOXD2O60548 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXD2O60548 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.76■□□□□ 0.75
FOXD2O60548 AC010203.1-204ENST00000548782 407 ntBASIC19.76■□□□□ 0.75
FOXD2O60548 AP005242.2-201ENST00000580065 1175 ntBASIC19.76■□□□□ 0.75
FOXD2O60548 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.76■□□□□ 0.75
FOXD2O60548 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXD2O60548 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
FOXD2O60548 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXD2O60548 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms