Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SSX4O60224 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SSX4O60224 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SSX4O60224 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX4O60224 AL512625.2-201ENST00000417533 625 ntBASIC17.78■□□□□ 0.44
SSX4O60224 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX4O60224 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.78■□□□□ 0.44
SSX4O60224 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX4O60224 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX4O60224 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.78■□□□□ 0.44
SSX4O60224 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.78■□□□□ 0.44
SSX4O60224 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSX4O60224 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SSX4O60224 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX4O60224 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSX4O60224 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX4O60224 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX4O60224 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SSX4O60224 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX4O60224 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX4O60224 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSX4O60224 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX4O60224 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.77■□□□□ 0.44
SSX4O60224 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.77■□□□□ 0.44
SSX4O60224 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SSX4O60224 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.77■□□□□ 0.44
SSX4O60224 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SSX4O60224 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
SSX4O60224 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.77■□□□□ 0.43
SSX4O60224 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSX4O60224 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SSX4O60224 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
SSX4O60224 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.76■□□□□ 0.43
SSX4O60224 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SSX4O60224 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 KRT18P29-201ENST00000397031 1267 ntBASIC17.76■□□□□ 0.43
SSX4O60224 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX4O60224 POU5F1P3-201ENST00000428824 1078 ntBASIC17.76■□□□□ 0.43
SSX4O60224 AC092118.2-201ENST00000613495 667 ntBASIC17.76■□□□□ 0.43
SSX4O60224 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SSX4O60224 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX4O60224 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX4O60224 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SSX4O60224 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.76■□□□□ 0.43
SSX4O60224 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX4O60224 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX4O60224 KRT16P2-201ENST00000414673 1423 ntBASIC17.75■□□□□ 0.43
SSX4O60224 AC093484.2-201ENST00000580996 2166 ntBASIC17.75■□□□□ 0.43
SSX4O60224 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.75■□□□□ 0.43
SSX4O60224 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX4O60224 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX4O60224 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SSX4O60224 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SSX4O60224 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SSX4O60224 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.75■□□□□ 0.43
SSX4O60224 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX4O60224 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX4O60224 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SSX4O60224 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX4O60224 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SSX4O60224 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.74■□□□□ 0.43
SSX4O60224 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.74■□□□□ 0.43
SSX4O60224 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms