Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC28A2O43868 AFG3L1P-217ENST00000557444 2447 ntBASIC18.94■□□□□ 0.62
SLC28A2O43868 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SLC28A2O43868 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SLC28A2O43868 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLC28A2O43868 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC28A2O43868 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC28A2O43868 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.93■□□□□ 0.62
SLC28A2O43868 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC28A2O43868 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLC28A2O43868 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC28A2O43868 AC092865.7-201ENST00000641832 219 ntBASIC18.93■□□□□ 0.62
SLC28A2O43868 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC28A2O43868 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLC28A2O43868 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC28A2O43868 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SLC28A2O43868 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC28A2O43868 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC28A2O43868 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SLC28A2O43868 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
SLC28A2O43868 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC28A2O43868 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC28A2O43868 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC28A2O43868 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC28A2O43868 FAM21FP-204ENST00000608637 956 ntBASIC18.92■□□□□ 0.62
SLC28A2O43868 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC28A2O43868 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC28A2O43868 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
SLC28A2O43868 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC28A2O43868 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SLC28A2O43868 KRT8P36-201ENST00000489121 1440 ntBASIC18.91■□□□□ 0.62
SLC28A2O43868 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC28A2O43868 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 AC239809.2-201ENST00000415381 517 ntBASIC18.91■□□□□ 0.62
SLC28A2O43868 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC28A2O43868 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SLC28A2O43868 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.91■□□□□ 0.62
SLC28A2O43868 AL023875.1-201ENST00000640777 796 ntBASIC18.91■□□□□ 0.62
SLC28A2O43868 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC28A2O43868 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC28A2O43868 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A2O43868 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC28A2O43868 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC28A2O43868 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A2O43868 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC28A2O43868 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A2O43868 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC28A2O43868 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC28A2O43868 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.9■□□□□ 0.62
SLC28A2O43868 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 AC124016.1-201ENST00000609552 612 ntBASIC18.9■□□□□ 0.62
SLC28A2O43868 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC28A2O43868 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC28A2O43868 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SLC28A2O43868 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC28A2O43868 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SLC28A2O43868 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms