Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.56■□□□□ 0.72
PHGDHO43175 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.56■□□□□ 0.72
PHGDHO43175 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.56■□□□□ 0.72
PHGDHO43175 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 AC133552.2-202ENST00000575694 574 ntBASIC19.56■□□□□ 0.72
PHGDHO43175 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.56■□□□□ 0.72
PHGDHO43175 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PHGDHO43175 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.56■□□□□ 0.72
PHGDHO43175 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 AIRN-201ENST00000601203 4374 ntBASIC19.56■□□□□ 0.72
PHGDHO43175 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 Z82202.1-201ENST00000623446 1880 ntBASIC19.56■□□□□ 0.72
PHGDHO43175 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.56■□□□□ 0.72
PHGDHO43175 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.55■□□□□ 0.72
PHGDHO43175 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PHGDHO43175 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 GPX1P1-201ENST00000388829 606 ntBASIC19.55■□□□□ 0.72
PHGDHO43175 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PHGDHO43175 CDCA4P2-201ENST00000441182 718 ntBASIC19.55■□□□□ 0.72
PHGDHO43175 AL020996.1-203ENST00000536896 2307 ntBASIC19.55■□□□□ 0.72
PHGDHO43175 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
PHGDHO43175 AC105036.2-201ENST00000569468 176 ntBASIC19.55■□□□□ 0.72
PHGDHO43175 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PHGDHO43175 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.55■□□□□ 0.72
PHGDHO43175 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHGDHO43175 MKRN4P-201ENST00000444706 1521 ntBASIC19.55■□□□□ 0.72
PHGDHO43175 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PHGDHO43175 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PHGDHO43175 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.55■□□□□ 0.72
PHGDHO43175 BX323043.1-201ENST00000641006 1765 ntBASIC19.55■□□□□ 0.72
PHGDHO43175 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.54■□□□□ 0.72
PHGDHO43175 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
PHGDHO43175 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 MIR663A-201ENST00000385250 93 ntBASIC19.54■□□□□ 0.72
PHGDHO43175 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.54■□□□□ 0.72
PHGDHO43175 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.54■□□□□ 0.72
PHGDHO43175 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
PHGDHO43175 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PHGDHO43175 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHGDHO43175 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.53■□□□□ 0.72
PHGDHO43175 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.53■□□□□ 0.72
PHGDHO43175 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PHGDHO43175 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.53■□□□□ 0.72
PHGDHO43175 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PHGDHO43175 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
PHGDHO43175 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.52■□□□□ 0.72
PHGDHO43175 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHGDHO43175 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms