Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.98■□□□□ 0.95
O00370 AC069544.1-201ENST00000609399 999 ntBASIC20.98■□□□□ 0.95
O00370 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.98■□□□□ 0.95
O00370 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.98■□□□□ 0.95
O00370 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.98■□□□□ 0.95
O00370 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.98■□□□□ 0.95
O00370 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
O00370 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
O00370 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 TFP1-202ENST00000475455 1573 ntBASIC20.97■□□□□ 0.95
O00370 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.97■□□□□ 0.95
O00370 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.97■□□□□ 0.95
O00370 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.97■□□□□ 0.95
O00370 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
O00370 AL121829.2-201ENST00000620908 328 ntBASIC20.97■□□□□ 0.95
O00370 AL121906.2-201ENST00000621597 723 ntBASIC20.97■□□□□ 0.95
O00370 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
O00370 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.96■□□□□ 0.95
O00370 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
O00370 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
O00370 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.96■□□□□ 0.95
O00370 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
O00370 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 KRT17P3-201ENST00000420566 1262 ntBASIC20.96■□□□□ 0.95
O00370 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.96■□□□□ 0.95
O00370 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.96■□□□□ 0.95
O00370 AC006058.3-201ENST00000606217 1069 ntBASIC20.96■□□□□ 0.95
O00370 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
O00370 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
O00370 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
O00370 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
O00370 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
O00370 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
O00370 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
O00370 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.95■□□□□ 0.94
O00370 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.95■□□□□ 0.94
O00370 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
O00370 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
O00370 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
O00370 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
O00370 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.95■□□□□ 0.94
O00370 AC073648.6-201ENST00000641589 218 ntBASIC20.95■□□□□ 0.94
O00370 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
O00370 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.95■□□□□ 0.94
O00370 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
O00370 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.95■□□□□ 0.94
O00370 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
O00370 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.94■□□□□ 0.94
O00370 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
O00370 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
O00370 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.94■□□□□ 0.94
O00370 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
O00370 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
O00370 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.94■□□□□ 0.94
O00370 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.94■□□□□ 0.94
O00370 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms