Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
AP3B1O00203 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.88■□□□□ 0.77
AP3B1O00203 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.88■□□□□ 0.77
AP3B1O00203 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.88■□□□□ 0.77
AP3B1O00203 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.88■□□□□ 0.77
AP3B1O00203 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
AP3B1O00203 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 AC093484.2-201ENST00000580996 2166 ntBASIC19.88■□□□□ 0.77
AP3B1O00203 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.88■□□□□ 0.77
AP3B1O00203 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 BX323043.1-201ENST00000641006 1765 ntBASIC19.88■□□□□ 0.77
AP3B1O00203 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3B1O00203 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 TFP1-202ENST00000475455 1573 ntBASIC19.87■□□□□ 0.77
AP3B1O00203 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 TSPY6P-201ENST00000448518 926 ntBASIC19.87■□□□□ 0.77
AP3B1O00203 AC097658.1-201ENST00000475555 843 ntBASIC19.87■□□□□ 0.77
AP3B1O00203 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.87■□□□□ 0.77
AP3B1O00203 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
AP3B1O00203 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
AP3B1O00203 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
AP3B1O00203 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3B1O00203 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
AP3B1O00203 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.86■□□□□ 0.77
AP3B1O00203 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
AP3B1O00203 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
AP3B1O00203 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.86■□□□□ 0.77
AP3B1O00203 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.86■□□□□ 0.77
AP3B1O00203 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3B1O00203 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
AP3B1O00203 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
AP3B1O00203 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
AP3B1O00203 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.85■□□□□ 0.77
AP3B1O00203 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
AP3B1O00203 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.85■□□□□ 0.77
AP3B1O00203 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.85■□□□□ 0.77
AP3B1O00203 HLA-B-256ENST00000639848 1089 ntBASIC19.85■□□□□ 0.77
AP3B1O00203 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
AP3B1O00203 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.85■□□□□ 0.77
AP3B1O00203 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.85■□□□□ 0.77
AP3B1O00203 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.85■□□□□ 0.77
AP3B1O00203 Z82202.1-201ENST00000623446 1880 ntBASIC19.85■□□□□ 0.77
AP3B1O00203 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
AP3B1O00203 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3B1O00203 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3B1O00203 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3B1O00203 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.84■□□□□ 0.77
AP3B1O00203 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.84■□□□□ 0.77
AP3B1O00203 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3B1O00203 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
AP3B1O00203 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.84■□□□□ 0.77
AP3B1O00203 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3B1O00203 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms