Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 AP006587.1-201ENST00000534129 1502 ntBASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV41A0A0B4J266 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 C1QBPP2-201ENST00000528754 825 ntBASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 TMEM191A-211ENST00000637163 1067 ntBASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 AL023875.1-201ENST00000640777 796 ntBASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV41A0A0B4J266 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 KRASP1-201ENST00000407852 552 ntBASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 PCDHAC2-203ENST00000615316 3011 ntBASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV41A0A0B4J266 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV41A0A0B4J266 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms