Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MIR663A-201ENST00000385250 93 ntBASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 GPX1P1-201ENST00000388829 606 ntBASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 BX276092.2-201ENST00000417668 665 ntBASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC120498.9-201ENST00000339021 3867 ntBASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AL390719.1-204ENST00000412397 1219 ntBASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AL050303.2-201ENST00000619798 666 ntBASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms