Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AL139824.2-201ENST00000458731 1095 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 Y_RNA.717-201ENST00000517106 92 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC060775.1-201ENST00000518241 520 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 NANOGNBP2-201ENST00000544753 553 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC093510.2-201ENST00000562820 896 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 ZNF92P2-201ENST00000600543 1059 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC068768.2-201ENST00000602352 343 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC009974.1-201ENST00000608881 455 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC024255.1-201ENST00000614376 102 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 AC073488.3-201ENST00000631611 778 ntBASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CTDP1Q9Y5B0 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 SAMMSON-210ENST00000641260 1308 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 SNORA43.1-201ENST00000364863 140 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC245096.1-201ENST00000413104 546 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 MTND4LP17-201ENST00000414607 293 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 RPL12P12-201ENST00000424633 501 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 MTCO2P1-201ENST00000424648 477 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC073508.1-201ENST00000428866 656 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 MTND4LP14-201ENST00000429447 288 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 RPL12P16-201ENST00000431098 498 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC011742.2-201ENST00000443818 352 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 GAPDHP23-201ENST00000444823 993 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 FTLP8-201ENST00000446770 267 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC009963.4-201ENST00000448535 339 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC092967.1-201ENST00000449016 481 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 MTCYBP14-201ENST00000457471 715 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 PPP1R11P1-201ENST00000486095 376 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 RNA5SP434-201ENST00000516647 121 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 RNA5SP271-201ENST00000516700 88 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC135626.1-201ENST00000556983 435 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 LINC00556-201ENST00000569603 412 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC090236.2-201ENST00000587933 1101 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AL591167.1-201ENST00000607321 456 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC096708.4-201ENST00000620563 552 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AL356863.1-201ENST00000623378 1080 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms