Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 FRG2FP-204ENST00000453982 852 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC099521.1-201ENST00000482557 334 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AP001960.1-201ENST00000506494 658 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC006499.4-201ENST00000510947 694 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 IGLV3-30-201ENST00000524362 298 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AL121594.2-201ENST00000541658 472 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC068305.2-201ENST00000550567 1205 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 AP000550.3-201ENST00000637734 379 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 PDZK1P1-202ENST00000425209 1350 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 MFSD8-239ENST00000641590 2479 ntBASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG4BQ9Y4P1 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 RNA5SP500-201ENST00000364486 119 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 LYPLA1P3-201ENST00000402650 695 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 IPPKP1-201ENST00000422501 768 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 BX323845.3-201ENST00000428215 527 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 CDY8P-201ENST00000428380 1279 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 PCBP2P1-201ENST00000437262 977 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AC015983.1-201ENST00000441577 373 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 CDY20P-201ENST00000447528 1279 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AL358876.1-201ENST00000453364 1075 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 SEPT14P1-201ENST00000458703 648 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 ACA64.1-201ENST00000459171 127 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 RNU1-88P-201ENST00000459274 128 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AC084754.1-201ENST00000463466 464 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 GAPDHP71-201ENST00000511530 1003 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AC114781.3-201ENST00000512083 142 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AP001267.4-201ENST00000602598 545 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 THAP12P8-201ENST00000447914 2115 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AC015799.1-201ENST00000622996 3122 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 AC112255.1-201ENST00000624070 2493 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 CR382285.2-201ENST00000624662 1495 ntBASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4BQ9Y4P1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms