Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RN7SL583P-201ENST00000475692 287 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 RNA5SP362-201ENST00000516048 118 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 AC122688.1-201ENST00000541494 223 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 HNRNPCP1-201ENST00000556181 766 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 FO393422.1-201ENST00000603908 708 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 AL049634.1-201ENST00000453770 1720 ntBASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.59□□□□□ -1.19
NPC1L1Q9UHC9 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 RNA5SP132-201ENST00000364725 118 ntBASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 RIMKLBP2-201ENST00000424737 654 ntBASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 LINC02210-201ENST00000444561 288 ntBASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 AL451063.1-201ENST00000450164 1133 ntBASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 RN7SL466P-201ENST00000497546 295 ntBASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 AC022404.1-201ENST00000555320 273 ntBASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 MRPS21P7-201ENST00000566937 238 ntBASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.59□□□□□ -1.2
NPC1L1Q9UHC9 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 TTC41P-205ENST00000551270 3963 ntBASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 OFD1P17-201ENST00000437639 3018 ntBASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 RN7SKP124-201ENST00000364730 341 ntBASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 TNPO1P1-201ENST00000423641 1138 ntBASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 RBM22P12-201ENST00000567098 1255 ntBASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 H3F3BP2-201ENST00000583907 357 ntBASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.58□□□□□ -1.2
NPC1L1Q9UHC9 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC007114.2-201ENST00000576014 4281 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AL034549.2-201ENST00000618285 3373 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 RNA5SP183-201ENST00000362452 119 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 RMRPP5-201ENST00000411156 267 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 PRUNEP1-201ENST00000425846 705 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC026348.1-201ENST00000462549 1053 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 OR5AM1P-201ENST00000532136 1032 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms