Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
RIMBP3Q9UFD9 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.74□□□□□ -1.01
RIMBP3Q9UFD9 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RIMBP3Q9UFD9 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RIMBP3Q9UFD9 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
RIMBP3Q9UFD9 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RIMBP3Q9UFD9 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.74□□□□□ -1.01
RIMBP3Q9UFD9 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
RIMBP3Q9UFD9 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 AC011369.2-201ENST00000624423 1567 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 RNA5-8SP7-201ENST00000363443 155 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 RNA5SP113-201ENST00000410486 84 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 NPM1P33-201ENST00000438918 872 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 Z95327.1-201ENST00000446082 482 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 RNA5SP143-201ENST00000516936 115 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 RNA5SP373-201ENST00000517271 95 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 IGHV1-14-201ENST00000523391 241 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 AL121873.1-201ENST00000616013 524 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 AC092070.2-203ENST00000598377 3644 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 MAPK10-304ENST00000641341 3984 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 AL136981.1-203ENST00000451452 3844 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 MFSD8-217ENST00000641178 4374 ntBASIC8.73□□□□□ -1.01
RIMBP3Q9UFD9 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AL139039.2-201ENST00000407436 479 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 YWHABP1-201ENST00000445359 727 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 NDUFA5P8-201ENST00000449019 346 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 RPSAP51-201ENST00000497462 645 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AC138701.1-201ENST00000524329 714 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 KPNA2P3-201ENST00000584190 848 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AL157831.2-201ENST00000564681 3095 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 RN7SKP100-201ENST00000411258 284 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 GCSHP4-201ENST00000538792 439 ntBASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC8.72□□□□□ -1.01
RIMBP3Q9UFD9 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 AL162456.1-201ENST00000634535 2006 ntBASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 PWAR1-201ENST00000624188 2414 ntBASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RIMBP3Q9UFD9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 RPL34P20-201ENST00000442771 351 ntBASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 MED28P3-201ENST00000444288 531 ntBASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 EEF1A1P1-201ENST00000447052 739 ntBASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 NXF4-202ENST00000416098 1465 ntBASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RIMBP3Q9UFD9 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms