Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLCF1Q9UBD9 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 MTCO1P11-201ENST00000429111 1528 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AL451046.1-201ENST00000406097 534 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 RNA5SP251-201ENST00000410614 137 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AL121776.1-201ENST00000429337 372 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC242426.1-201ENST00000435270 960 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 GAPDHP48-201ENST00000436626 961 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC096775.1-201ENST00000437724 448 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 EEF1B2P6-201ENST00000445713 673 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC073909.1-201ENST00000447112 999 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AL136038.1-201ENST00000497246 351 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC109481.1-201ENST00000509173 282 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC074255.1-201ENST00000511259 501 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 RNA5SP362-201ENST00000516048 118 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC021678.3-201ENST00000517893 476 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 MRPS16P1-201ENST00000523462 412 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 MIR4505-201ENST00000582238 73 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC109309.2-201ENST00000612597 332 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 CU639417.4-201ENST00000623928 207 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC068769.1-201ENST00000474767 2426 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 AC005224.3-201ENST00000584683 2140 ntBASIC5.14□□□□□ -1.59
CLCF1Q9UBD9 MFSD8-219ENST00000641228 2559 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC007842.1-201ENST00000597336 2039 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 SNORD1C-201ENST00000363315 78 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 SNORA70.9-201ENST00000384370 135 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 RN7SKP229-201ENST00000410465 302 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AL365220.1-201ENST00000432923 399 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AL590399.4-201ENST00000436561 601 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC005297.1-201ENST00000444765 862 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC006539.1-201ENST00000481419 501 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 RN7SL570P-201ENST00000484405 292 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 TRBV5-2-201ENST00000489095 273 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC105384.2-201ENST00000508433 640 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AL121594.2-201ENST00000541658 472 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC096996.1-201ENST00000563813 325 ntBASIC5.13□□□□□ -1.59
CLCF1Q9UBD9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms