Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 NUDT19P3-201ENST00000404698 555 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 GJA6P-201ENST00000415117 1042 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 C4BPAP2-201ENST00000428434 478 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AL590399.4-201ENST00000436561 601 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 MIR4737-201ENST00000583979 81 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC011487.3-201ENST00000593607 453 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 MTCO1P1-201ENST00000624263 1081 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 THAP12P4-201ENST00000528321 2266 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 NXF4-202ENST00000416098 1465 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 RNA5SP455-201ENST00000365190 119 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 RNA5SP113-201ENST00000410486 84 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC069213.2-201ENST00000420238 366 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AL389915.1-201ENST00000422463 466 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC233699.1-201ENST00000569955 1168 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 HIRAP1-201ENST00000605318 787 ntBASIC5.67□□□□□ -1.5
CHD7Q9P2D1 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD7Q9P2D1 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AC234779.1-201ENST00000425910 285 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 RPL36AP15-201ENST00000444514 266 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 GTF2IP11-201ENST00000526931 420 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AL391358.1-201ENST00000605342 190 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AC022034.1-201ENST00000512867 2156 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 LINC01963-201ENST00000562038 3148 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 HSPD1P7-201ENST00000447985 1686 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AC003973.3-201ENST00000624863 2822 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 TMA16P2-201ENST00000413187 601 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 RSU1P1-201ENST00000453416 441 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AGGF1P7-201ENST00000562369 913 ntBASIC5.66□□□□□ -1.5
CHD7Q9P2D1 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHD7Q9P2D1 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 AC079741.1-201ENST00000321498 212 ntBASIC5.65□□□□□ -1.5
CHD7Q9P2D1 RNA5SP487-201ENST00000410186 122 ntBASIC5.65□□□□□ -1.5
CHD7Q9P2D1 ELOCP19-201ENST00000411919 318 ntBASIC5.65□□□□□ -1.5
CHD7Q9P2D1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 DHFRP1-201ENST00000579682 559 ntBASIC5.65□□□□□ -1.5
CHD7Q9P2D1 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHD7Q9P2D1 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms