Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AC007159.1-201ENST00000566529 4706 ntBASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
KIAA1549Q9HCM3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 U3.7-201ENST00000363668 216 ntBASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 NPM1P4-201ENST00000414095 812 ntBASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 AC074386.1-201ENST00000476560 767 ntBASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 RN7SL547P-201ENST00000490793 290 ntBASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 NPM1P42-201ENST00000560329 862 ntBASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 AC119501.1-201ENST00000603646 475 ntBASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 AL021707.7-201ENST00000607991 416 ntBASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
KIAA1549Q9HCM3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 MIR143-201ENST00000385300 106 ntBASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 MARK2P12-201ENST00000420129 585 ntBASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 VDAC2P4-201ENST00000452925 711 ntBASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 Z83820.1-201ENST00000456978 1499 ntBASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 AL117339.4-201ENST00000608335 7063 ntBASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
KIAA1549Q9HCM3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 NIFKP3-201ENST00000417799 865 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 TNPO1P1-201ENST00000423641 1138 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AL121776.1-201ENST00000429337 372 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AL450023.1-201ENST00000450868 751 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC006499.3-201ENST00000506077 748 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 RN7SKP67-201ENST00000515905 235 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC006115.2-201ENST00000596823 202 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AL118522.2-201ENST00000616045 615 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AP000432.2-201ENST00000624164 2048 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC015799.1-201ENST00000622996 3122 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC079753.1-201ENST00000623243 3868 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 CR788268.1-201ENST00000603931 1809 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 AC109780.1-201ENST00000451768 1344 ntBASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KIAA1549Q9HCM3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms