Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC106734.1-201ENST00000568646 663 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 MIR744-201ENST00000578242 98 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AL683813.2-201ENST00000605245 502 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC004908.1-201ENST00000606572 541 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC091768.1-201ENST00000609258 930 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC093278.2-201ENST00000564956 2485 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 AC083806.2-201ENST00000617795 2685 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 CLCA3P-203ENST00000490028 2781 ntBASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A2Q9H9S3 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL512353.3-201ENST00000417517 1326 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 MIR365B-201ENST00000362317 111 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 U6.112-201ENST00000384129 70 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 RNU6-517P-201ENST00000384362 110 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 MCTS2P-201ENST00000394552 546 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 RAB5CP1-201ENST00000395972 580 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC017035.1-201ENST00000411999 1115 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 BX119321.1-201ENST00000428912 797 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC007563.3-201ENST00000433233 371 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 TAF9P1-201ENST00000445421 515 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 TAF9P2-201ENST00000454958 515 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 NDUFA12P1-201ENST00000455914 406 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL096803.1-201ENST00000456921 1021 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 PPP1R2P6-201ENST00000478565 588 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC090114.3-201ENST00000479267 829 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL079303.1-201ENST00000486611 463 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 RN7SL187P-201ENST00000495587 303 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC026414.1-201ENST00000504046 698 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC021087.2-201ENST00000504656 1203 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AK4P6-201ENST00000505168 528 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 OR8I1P-201ENST00000529291 931 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 RN7SL622P-201ENST00000585292 275 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AP000811.1-201ENST00000603803 651 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL031601.1-201ENST00000605702 394 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AP001596.2-201ENST00000608410 312 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC015540.1-201ENST00000615828 501 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AC005609.4-201ENST00000625071 447 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AL357140.4-201ENST00000636827 412 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 OR7E91P-202ENST00000642062 1198 ntBASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SEC61A2Q9H9S3 AP000547.3-204ENST00000588548 2523 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms