Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM4Q9C037 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM4Q9C037 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC114774.1-201ENST00000507410 1770 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 AC019072.1-201ENST00000604535 1551 ntBASIC5.97□□□□□ -1.45
TRIM4Q9C037 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM4Q9C037 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM4Q9C037 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM4Q9C037 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM4Q9C037 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM4Q9C037 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.45
TRIM4Q9C037 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM4Q9C037 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM4Q9C037 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM4Q9C037 HSPD1P9-201ENST00000420325 1636 ntBASIC5.96□□□□□ -1.45
TRIM4Q9C037 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.96□□□□□ -1.45
TRIM4Q9C037 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM4Q9C037 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM4Q9C037 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 RNA5SP478-201ENST00000364657 115 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 MIR130B-202ENST00000385018 82 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC016027.5-201ENST00000427227 210 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 MTND2P40-201ENST00000436718 841 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 OR13K1P-201ENST00000444577 975 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 RPL7L1P3-201ENST00000455249 689 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 OR7E99P-201ENST00000505750 922 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 RNA5SP271-201ENST00000516700 88 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 OR8Q1P-201ENST00000526467 655 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC009120.3-201ENST00000563335 499 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC027229.1-201ENST00000583887 253 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 AL021368.3-201ENST00000607119 578 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 AC020656.2-201ENST00000613291 5309 ntBASIC5.96□□□□□ -1.46
TRIM4Q9C037 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
TRIM4Q9C037 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM4Q9C037 PCAT14-202ENST00000627127 3935 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 RN7SKP108-201ENST00000411367 328 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 HMGN1P36-201ENST00000446623 298 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 RPSAP39-201ENST00000467439 883 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 UBFD1P1-201ENST00000473259 814 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 AC105420.1-201ENST00000504389 582 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 AL158068.1-201ENST00000506116 616 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 ATP5LP3-201ENST00000514223 304 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 RNA5SP362-201ENST00000516048 118 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 RNA5SP206-201ENST00000516703 121 ntBASIC5.95□□□□□ -1.46
TRIM4Q9C037 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM4Q9C037 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TRIM4Q9C037 OR7A8P-201ENST00000595427 913 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms