Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 MIR7853-201ENST00000584820 132 ntBASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 AL049829.3-202ENST00000604278 711 ntBASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 ICE2P1-201ENST00000512800 1849 ntBASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC28BQ9BUN5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC28BQ9BUN5 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.59□□□□□ -1.52
CCDC28BQ9BUN5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC28BQ9BUN5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CCDC28BQ9BUN5 MFSD8-219ENST00000641228 2559 ntBASIC5.59□□□□□ -1.52
CCDC28BQ9BUN5 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AL121886.1-201ENST00000358609 435 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 RN7SKP108-201ENST00000411367 328 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC019205.1-201ENST00000421830 730 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 GAPDHP19-201ENST00000431768 1005 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC010086.1-201ENST00000437359 1052 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 RBMY2AP-201ENST00000445405 1157 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 RBMY2CP-201ENST00000448575 1157 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 RBMY2DP-202ENST00000448881 1157 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 RN7SL393P-201ENST00000463588 296 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 OR7E22P-201ENST00000478335 1035 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC098976.1-201ENST00000513014 541 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 ZNF519P4-201ENST00000514008 125 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC139697.1-201ENST00000548429 745 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC024267.2-201ENST00000582737 417 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 MIR212-201ENST00000586026 110 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 MIR6070-201ENST00000613967 103 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AL512652.1-201ENST00000619006 500 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC089999.3-201ENST00000622440 577 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 OR4F13P-202ENST00000560066 2054 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AL031595.2-201ENST00000624215 19071 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 AC104623.2-202ENST00000623477 4002 ntBASIC5.58□□□□□ -1.52
CCDC28BQ9BUN5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AP001642.1-201ENST00000624727 2117 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC008079.2-201ENST00000623543 20396 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 ZNF652P1-201ENST00000442420 1309 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AL731566.1-201ENST00000620490 1937 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 ARSFP1-201ENST00000398758 477 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 THEM7P-201ENST00000419556 672 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 PCBP2P1-201ENST00000437262 977 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 BMS1P10-201ENST00000443754 1120 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 AC092865.4-201ENST00000477936 615 ntBASIC5.57□□□□□ -1.52
CCDC28BQ9BUN5 RPS4XP17-201ENST00000479057 754 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms