Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 MIR1286-201ENST00000408112 78 ntBASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 VN1R21P-201ENST00000426703 765 ntBASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 RPS3AP38-201ENST00000435889 763 ntBASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AL672138.1-201ENST00000450604 1015 ntBASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 PDCL3P4-201ENST00000489621 720 ntBASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 OR11J2P-201ENST00000555298 907 ntBASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC007346.2-201ENST00000564816 892 ntBASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 RPL10P14-201ENST00000565265 298 ntBASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP2Q96SN8 AP004607.3-201ENST00000530354 3915 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 RPL23AP17-201ENST00000401064 499 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 RPL32P9-201ENST00000487963 407 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 CDC42P3-201ENST00000518493 633 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 BLZF2P-201ENST00000553776 1130 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 ABCA11P-202ENST00000504019 2110 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 MT-RNR2-201ENST00000387347 1559 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 AL589647.1-201ENST00000402485 466 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 AC105399.1-202ENST00000447303 205 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 RN7SL184P-201ENST00000488308 297 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 AGGF1P7-201ENST00000562369 913 ntBASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDK5RAP2Q96SN8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 SNORA70.9-201ENST00000384370 135 ntBASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 AK3P5-201ENST00000432033 519 ntBASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 PGAM1P13-201ENST00000507497 754 ntBASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 C4BPAP1-201ENST00000415474 1893 ntBASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP2Q96SN8 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP2Q96SN8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP2Q96SN8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP2Q96SN8 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP2Q96SN8 AL353796.1-201ENST00000561542 3241 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 328 ms