Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AP003175.1-201ENST00000641383 6658 ntBASIC9.17□□□□□ -0.94
IFT140Q96RY7 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 AC007562.1-201ENST00000421819 517 ntBASIC9.17□□□□□ -0.94
IFT140Q96RY7 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 AC023274.2-201ENST00000445264 521 ntBASIC9.17□□□□□ -0.94
IFT140Q96RY7 Z92846.1-201ENST00000456203 268 ntBASIC9.17□□□□□ -0.94
IFT140Q96RY7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 IGBP1P5-201ENST00000507524 1000 ntBASIC9.17□□□□□ -0.94
IFT140Q96RY7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 AC068790.7-201ENST00000602347 528 ntBASIC9.17□□□□□ -0.94
IFT140Q96RY7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
IFT140Q96RY7 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
IFT140Q96RY7 THAP12P4-201ENST00000528321 2266 ntBASIC9.17□□□□□ -0.94
IFT140Q96RY7 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 DDX39BP1-205ENST00000422507 192 ntBASIC9.16□□□□□ -0.94
IFT140Q96RY7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 MGAT2P2-201ENST00000427194 797 ntBASIC9.16□□□□□ -0.94
IFT140Q96RY7 AC073264.2-201ENST00000448886 166 ntBASIC9.16□□□□□ -0.94
IFT140Q96RY7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
IFT140Q96RY7 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 AGGF1P7-201ENST00000562369 913 ntBASIC9.16□□□□□ -0.94
IFT140Q96RY7 AC060766.1-201ENST00000590824 627 ntBASIC9.16□□□□□ -0.94
IFT140Q96RY7 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
IFT140Q96RY7 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
IFT140Q96RY7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
IFT140Q96RY7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
IFT140Q96RY7 AC092724.1-201ENST00000624623 3397 ntBASIC9.16□□□□□ -0.94
IFT140Q96RY7 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 AL353763.1-201ENST00000624467 1628 ntBASIC9.16□□□□□ -0.94
IFT140Q96RY7 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
IFT140Q96RY7 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 SNORA70.2-201ENST00000364506 135 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 AC016027.5-201ENST00000427227 210 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 GSTM5P1-201ENST00000434751 660 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 AC009127.1-201ENST00000467090 155 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 KRTAP5-14P-201ENST00000502328 121 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 HPRT1P1-201ENST00000509498 657 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 MTND6P2-201ENST00000512226 524 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 MIR4270-201ENST00000581799 70 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 AC068831.8-201ENST00000620171 435 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 AC132825.1-201ENST00000463573 2247 ntBASIC9.15□□□□□ -0.94
IFT140Q96RY7 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
IFT140Q96RY7 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
IFT140Q96RY7 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
IFT140Q96RY7 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
IFT140Q96RY7 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
IFT140Q96RY7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
IFT140Q96RY7 AC079741.1-201ENST00000321498 212 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 AC092570.3-201ENST00000420113 693 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 OR5M12P-201ENST00000423388 929 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC9.15□□□□□ -0.95
IFT140Q96RY7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
IFT140Q96RY7 AC020898.1-201ENST00000474167 787 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 OR7H2P-201ENST00000513483 306 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 RNA5SP373-201ENST00000517271 95 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms