Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 OR13K1P-201ENST00000444577 975 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC023274.2-201ENST00000445264 521 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 STRADBP1-201ENST00000478954 1281 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 LARP7P4-201ENST00000481075 878 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC021006.1-201ENST00000489849 553 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 NPM1P28-201ENST00000492269 840 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 AP002453.1-201ENST00000492327 668 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC091874.2-201ENST00000505889 720 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC136777.2-201ENST00000522979 358 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 TRAV11-201ENST00000539512 339 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 OR4H6P-201ENST00000563771 921 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 OR1E3-201ENST00000575608 948 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 AP001357.1-201ENST00000586304 1053 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VMP1Q96GC9 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VMP1Q96GC9 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VMP1Q96GC9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VMP1Q96GC9 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 GUCY1B2-204ENST00000531898 1979 ntBASIC5.87□□□□□ -1.47
VMP1Q96GC9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VMP1Q96GC9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VMP1Q96GC9 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 BTBD10P1-201ENST00000549824 1352 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 KYNUP3-201ENST00000574386 1341 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC092451.3-201ENST00000625067 1343 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 RNU6-1251P-201ENST00000364502 107 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 RPL10P10-201ENST00000403509 664 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 RN7SKP144-201ENST00000411108 279 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 UBE2V1P14-201ENST00000415815 558 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC013470.3-201ENST00000420252 1194 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC007064.3-201ENST00000422608 359 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AL365220.1-201ENST00000432923 399 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 TPTE2P1-204ENST00000435256 593 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC079922.1-201ENST00000443291 359 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 BUD31P2-201ENST00000449374 300 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC103563.5-201ENST00000455643 364 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 VPS25P1-201ENST00000455691 508 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC104339.1-201ENST00000465478 348 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC037198.2-201ENST00000478845 733 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC095052.1-201ENST00000509955 863 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 MAST4-IT1-201ENST00000514241 658 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 RNA5SP473-201ENST00000516402 125 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC093591.2-201ENST00000565254 3843 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC002519.2-203ENST00000567043 837 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 MIR4271-201ENST00000582451 67 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC005726.4-201ENST00000582858 458 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 AL357140.4-201ENST00000636827 412 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.86□□□□□ -1.47
VMP1Q96GC9 SAMMSON-209ENST00000641222 1100 ntBASIC5.86□□□□□ -1.47
VMP1Q96GC9 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms