Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC245452.2-201ENST00000435222 392 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 AL451136.1-201ENST00000435399 325 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 RNFT1P2-201ENST00000443064 757 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 OR2L9P-201ENST00000444456 913 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF31Q96EP0 RPL12P30-201ENST00000488389 499 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 HMGB1P38-201ENST00000490557 577 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 FABP5P6-201ENST00000510588 409 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 RNU6-1334P-201ENST00000516032 105 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 SNORA74.1-201ENST00000516320 180 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF31Q96EP0 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC093014.1-201ENST00000548926 724 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AL591767.3-201ENST00000554632 525 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC011497.2-201ENST00000600255 639 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC026741.1-201ENST00000605892 482 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 AL352984.2-202ENST00000613699 155 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF31Q96EP0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AC131009.3-201ENST00000621809 287 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 TNPO1P2-201ENST00000426249 2665 ntBASIC6.13□□□□□ -1.43
RNF31Q96EP0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF31Q96EP0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF31Q96EP0 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF31Q96EP0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF31Q96EP0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF31Q96EP0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 RNA5SP110-201ENST00000362638 115 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 MIR541-201ENST00000401360 84 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 MTCO2P31-201ENST00000402702 684 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 OR51B3P-201ENST00000412287 913 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 NIFKP3-201ENST00000417799 865 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 MTCO1P45-201ENST00000431457 267 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 ARL5AP3-201ENST00000439327 386 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AL591719.1-201ENST00000444669 744 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AL133351.3-201ENST00000454998 193 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 EIF1P7-201ENST00000487533 337 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 OR9N1P-202ENST00000494289 481 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC091874.2-201ENST00000505889 720 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 SUMO2P5-201ENST00000506790 245 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 NPM1P52-201ENST00000518264 846 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AP001207.2-201ENST00000519490 539 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 OR56A7P-201ENST00000524865 941 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC087894.1-201ENST00000538359 518 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC008055.1-201ENST00000547032 609 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC092868.3-201ENST00000560515 784 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 AC002310.3-201ENST00000569728 723 ntBASIC6.12□□□□□ -1.43
RNF31Q96EP0 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms